Leica CM3050 S
Cryostat
Instruction Manual
Leica CM3050 S – Cryostat
English V1.2– 11/2006
Always keep this manual near the instrument.
Read carefully prior to operating the instrument.
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Important note
Serial No.: .............. ......................................................
Year of Manufacture: ...............................................
Country of Origin: Federal Republic of Germany
The information contained in this document
represents state-of-the-art technology as well as
the current state of knowledge.
Leica will not assume liability for errors that might
be contained in this manual, nor for accidental
damage or damage arising from the delivery,
performance or use of this manual.
Therefore, no claims can be made based on the
text and illustrations in this instruction manual.
Leica Microsystems Nussloch GmbH reserves the
right to change technical specifications
without notice since each of our products is
subject to a policy of continuous improvement.
This document is protected under copyright laws.
Leica Microsystems Nussloch GmbH
retains all rights related to this documentation.
Any reproduction of text and illustrations - or any
parts thereof - in form of printing, photocopying,
microfiches, or other methods, including
electronic systems, requires the prior written
permission of Leica Microsystems Nussloch
GmbH.
The serial number and the year of manufacture
are specified on the nameplate at the back of the
instrument.
© Leica Microsystems Nussloch GmbH
Issued by:
Leica Microsystems Nussloch GmbH
Heidelberger Str. 17 - 19
D-69226 Nussloch
Germany
Phone: +49 6224 143-0
Fax: +49 6224 143-200
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Table of Contents
1.
Important information................................................................................................................ 7
1.1
1.2
Symbols used in this manual and .................................................................................................... 7
Designated use ................................................................................................................................... 8
1.3 Qualification of personnel .......................................................................................................... 8
2.
Sicherheit .................................................................................................................................... 9
2.1
2.2
General information on instrument design and safe handling .................................................... 9
Integrated safety devices ................................................................................................................. 9
2.2.1 Locking the handwheel ................................................................................................................... 10
2.2.2 Centering the handwheel grip ........................................................................................................ 10
2.2.3 Emergency stop function (instruments with sectioningmotor only) ........................................ 11
2.2.4 Knife guard ........................................................................................................................................ 11
2.3
Safety instructions: handling and operation of the instrument................................................. 12
2.3.1 Transport ........................................................................................................................................... 12
2.3.2 Site requirements ............................................................................................................................. 12
2.3.3 Electrical connections ..................................................................................................................... 12
2.3.4 Handling microtome knives/blades ............................................................................................... 13
2.3.5 Knife guard/handwheel lock........................................................................................................... 13
2.3.6 Motorized sectioning ....................................................................................................................... 13
2.3.7 Defrosting/Handling frozen tissue ................................................................................................. 13
2.3.8 Frozen parts of the instrument and frozen accessories ............................................................ 13
2.3.9 Infectious/radioactive material ...................................................................................................... 14
2.3.10 Disinfection and cleaning ............................................................................................................... 14
2.3.11 Removing/reinstalling the microtome ........................................................................................... 15
2.3.12 Display message ‘Dry microtome’ ................................................................................................. 15
2.3.13 Maintenance .............................................................................................................................. 15
3.
Installation................................................................................................................................. 16
3.1
Site requirements ............................................................................................................................. 16
3.1.1 General site requirements .............................................................................................................. 16
3.1.2 Electrical connections ..................................................................................................................... 16
3.2 Unpacking and installation ............................................................................................................. 16
3.2.1 Repacking .......................................................................................................................................... 16
3.3
3.4
Standard delivery ............................................................................................................................. 17
Installing/inserting accessories..................................................................................................... 19
3.4.1 Installing the handwheel ................................................................................................................. 19
3.4.2 Inserting the accessories ............................................................................................................... 19
3.4.3 The footswitch .................................................................................................................................. 20
3.5 Prior to switching on the instrument ........................................................................................ 20
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Table of Contents
4.
5.
Instrument Properties .............................................................................................................. 21
4.1 Overview ............................................................................................................................................ 21
4.2 Technical Data ........................................................................................................................... 23
Operation ................................................................................................................................... 25
5.1
5.2
5.3
Operating the instrument for the first time ................................................................................... 25
Switching on/fuses........................................................................................................................... 26
Control panel 1 .................................................................................................................................. 27
5.3.1 Key functions in control panel 1..................................................................................................... 27
5.3.2 Display functions in control panel 1 .............................................................................................. 27
5.3.3 Display indications when switching on ........................................................................................ 28
5.3.4 Menu functions: setting parameters of refrigeration, time and preset counter .................... 29
5.3.5 Status display .................................................................................................................................... 32
5.3.6 Indication of refrigeration state, section thickness setting and counters .............................. 33
5.4
Control panel 2 .................................................................................................................................. 34
5.4.1 Selecting a sectioning mode / ........................................................................................................ 35
5.4.2 Setting the sectioning window....................................................................................................... 36
5.4.3 Selecting sectioning speed ............................................................................................................ 37
5.4.4 Emergency stop ................................................................................................................................ 37
5.4.5 Coarse feed keys .............................................................................................................................. 38
5.4.6 Trimming and sectioning functions ............................................................................................... 39
5.4.7 Setting the section thickness ......................................................................................................... 39
5.5
Daily operation of the instrument .................................................................................................. 40
5.5.1 Freezing specimens onto specimen .............................................................................................. 40
5.5.2 Freezing specimens onto specimen .............................................................................................. 41
5.5.3 Optional accessories for freezing .................................................................................................. 41
5.5.4 Inserting specimen discs into the .................................................................................................. 42
5.5.5 Specimen orientation....................................................................................................................... 42
5.5.6 Trimming / sectioning ...................................................................................................................... 43
5.6
Finishing work ................................................................................................................................... 44
5.6.1 Daily routine steps............................................................................................................................ 44
5.6.2 Switching off the instrument for a ................................................................................................. 44
5.7
Defrosting .......................................................................................................................................... 45
5.7.1 Automatic chamber defrost cycle ................................................................................................. 45
5.7.2 Manual chamber defrost cycle ...................................................................................................... 46
5.7.3 Defrosting the specimen head ................................................................................................ 46
Leica CM3050S – Cryostat
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Table of contents
6.
Troubleshooting, applications tips ....................................................................................... 47
6.1
6.1.1 Other error indications .................................................................................................................... 47
6.2 Potential problems - causes and remedies ................................................................................. 48
Displayed error messages .............................................................................................................. 47
6.3 Reference chart for temperature settings (in minus °C) .................................................... 52
7.
Disinfection, cleaning and maintenance ............................................................................ 53
7.1
7.2
7.3
7.4
7.5
Safety instructions ........................................................................................................................... 53
Spray disinfection with Leica Cryofect ......................................................................................... 53
Disinfection with conventional ....................................................................................................... 54
Cleaning ............................................................................................................................................. 54
Removing / reinstalling the microtome ......................................................................................... 55
7.5.1 Removing the microtome ................................................................................................................ 55
7.5.2 Disassembling the specimen head................................................................................................ 55
7.5.3 Reinstalling the microtome ............................................................................................................. 56
7.6 Exchanging the fluorescent light lamp................................................................................... 57
8.
9.
Warranty and service .............................................................................................................. 58
Appendix .................................................................................................................................... 59
1.
Electrohydraulic height adjustment .............................................................................................. 59
Ordering information - accessories ....................................................................................... 62
2.
10. EC Declaration of Conformity ..................................................................................... 63
11. Decontamination Certificate (master) .................................................................................... 64
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1. Important information
The chapters of the Leica CM3050 S cryostat 1.1 Symbols used in this manual and
their meaning
instruction manual:
Warnings
appear in a grey box and are marked
by a warning triangle
Chapter 1 Structure of the manual:
•
•
Table of contents
.
Important information on this
manual
Chapter 2 Safety
Read this chapter before
operating the instrument!
Chapter 3 Installation
Notes
i.e. important user information
appears in a grey box and is marked
•
by an information
symbol.
•
•
Unpacking and installation
Standard delivery, information
on accessories
Figures in brackets refer to item
numbers in drawings or to the
drawings themselves.
(5)
(Fig.5)
Chapter 4 Instrument properties
•
•
Overview
Technical data
Instrument type:
All information given in this instruction manual
applies only to the instrument type indicated on
the title page.
Chapter 5 Operation
•
•
Controls
Setup, daily use and shut
down
A name plate, indicating the instrument serial
number, is attached to the back of the instru-
ment.
Chapter 6 Trouble shooting
and applications tips
•
•
•
Operating errors
Required in-
formation for
all inquiries:
Display error messages
Temperature reference chart
For any inquir-
please
Chapter 7 Disinfection, cleaning
and maintenance
ies
specify:
•
Instrument
type
Chapter 8 Warranty and service
Chapter 9 Electrohydraulic height adjustment
Ordering information accessories
EC Declaration of Conformity
•
Serial-
number
Leica CM 3050 S – Cryostat
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1. Important information
General
1.2 Designated use
This instruction manual includes important
instructions and information related to the
operating safety and maintenance of the
instrument.
The Leica CM3050S is a powerful cryostat for
routine as well as research applications in
biology, medicine and industry.
The instrument has been designed for rapid
freezing and sectioning of tissue samples.
The instruction manual is an important part of the
product. It must be read carefully before using
the instrument for the first time and must always
be kept with the instrument.
The instrument has not been designed for un-
attended storage of tissue material.
The instrument may only be operated within the
scope of its designated use as described above
and as per the instructions given in this manual.
If additional requirements, which exceed the
scope of this manual, are imposed by regula-tions
and/or laws on accident prevention and
environmental protection in the country of
operation, appropriate instructions for
compliance with such requirements must be
added to this manual.
Any other use of the instrument is considered
improper.
Read this instruction manual carefully before
attempting to use or operate the instrument.
1.3 Qualification of personnel
The Leica CM3050S may only be operated by
trained laboratory personnel.
Please pay particular attention to
(safety features, safety
Please read this
information, even if you are already
familiar with the operation and use of
other Leica products.
All laboratory personnel designated to operate the
instrument must carefully read the present
instruction manual prior to starting work with the
instrument.
chapter
instructions).
2
-
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2. Sicherheit
2.1 General information on instrument
design and safe handling
2.2 Integrated safety devices
The instrument is equipped with the following
safety devices:
This instrument has been built and tested in ac-
cordance with the following safety regulations
on electrical measuring, control, regulating and
laboratory devices:
•
•
•
Handwheel lock
Handwheel grip centering
Emergency stop function
•
•
•
•
•
DIN EN 292
DIN EN 61010-1
EN 50082-1
EN 55011
(instruments with sectioning motor only)
Knife holder equipped with knife guard
•
The safety devices installed by the manufactu-
rer of the instrument only constitute the basis of
accident prevention.
IEC 1000-4
Mainly responsible for accident-free operation
is above all the institution which owns the in-
strument and, in addition, the designated per-
sonnel who operate, service or repair the
instrument.
as well as according to the international quality
standard
•
DIN ISO 9001
In order to maintain this condition and to ensure
safe operation, the operator must observe the
instructions and warnings contained in this in-
struction manual.
Leica CM3050 S – Cryostat
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2. Safety
Instruments with sectioning motor:
2.2.1 Locking the handwheel
The sectioning motor is now blocked.
Always cover the cutting edge with
the knife guard and lock the hand-
wheel:
All instruments:
•
Prior to doing any work on
knife and/or specimen.
Prior to exchanging specimens.
During work breaks.
The message ‘LOCKED’ in the display of control
panel 1 indicates that the handwheel has been
locked:
•
•
C T - 3 0 ° C
O T - 3 5 ° C
L O C K E D
The handwheel can be locked in 2 positions:
•
•
with the grip in the uppermost position (left),
with the grip in the lowest position (right).
Unlocking:
•
To unlock, push locking pin (2) to the left into
position (2a).
2
•
Display indication ‘LOCKED’ disappears.
Instruments with sectioning motor:
The sectioning motor can now be activated
again.
2.2.2 Centering the handwheel grip
2
During motorized sectioning, for
safety reasons always center the
handwheel grip!
Locking:
•
•
Rotate handwheel, until grip (1) is in upper or
lower position.
To lock, press pin (2) to the right into position
(2b).
•
•
To center grip (1), pull outwards and pivot
into center of handwheel.
When released, the grip locks into position.
--> The upper locking position for pin (2) is
marked by a black dot (4).
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2.
Safety
2.2.3 Emergency stop function
(instruments with sectioning
motor only)
2.2.4 Knife guard
All knife holders are equipped with a knife
guard (--> see separate instruction manuals on
knife holders).
The emergency stop is activated via the red
emergency stop button in control panel 2 or via
the footswitch
Always cover the cutting edge with
the knife guard:
• Prior to doing any work on knife
and/ or specimen.
• Prior to exchanging specimens.
• During work breaks.
Control panel 2
Footswitch
Activating the emergency stop function
•
Press emergency stop button or step on
footswitch forcefully.
-->
STOP (red) lights up.
As soon as the emergency stop function is acti-
vated, the sectioning motor stops.
Deactivating the emergency stop
•
To deactivate, rotate emergency stop button
in direction of arrow.
If the emergency stop function has
been activated by the footswitch,
unlocking is not necessary (func-tion
is unlocked as soon as the footswitch
is released).
Leica CM3050 S – Cryostat
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2. Safety
2.3 Safety instructions: handling and operation of the instrument
2.3.3 Electrical connections
2.3.1 Transport
•
Do not use extension cords for connecting
the instrument to mains.
-->Fire hazard!
•
To avoid severe damage to the instrument by
running it while the compressor oil is dis-
placed from its regular position:
-->Instrument malfunctions caused by
voltage drop.
•
Do not tilt the instrument,
only transport in an upright position.
After transport, wait at least 4 hours be-
fore turning the instrument on.
•
•
During the start-up phase of the compressor,
the nominal voltage must not drop below the
values specified in chapter 4.2 ‘Technical
data’!
-->The compressor needs a start-up current
at between 25 and 35 A (see chapter 4.2
‘Technical data’)
-->The compressor oil may have been
displaced during transport and must
settle to its original position
be-
fore switchingthe instrument on.
Otherwise, the instrument may be
severely damaged.
•
Ensure uniform current supply according to
specifications.
2.3.2 Site requirements
-->Electrical power supply deviating from
specifications damages the instrument.
•
Do not operate the instrument in rooms with
explosion hazard.
•
Therefore, arrange for the electrical in-
stallations on site to be checked by a
trained professional and make sure any
necessary upgrades are installed!
Have the circuit protected by a fuse of its
own!
•
To ensure proper instrument function main-
tain a minimum distance of 10 cm between
walls and/or furniture and all sides of the in-
strument!
•
•
•
Do not connect any other consumers to
the same circuit.
Prior to connecting the instrument to
mains, make sure the electrical power
supply in your laboratory corresponds to
the values indicated on the instrument
nameplate (located at the rear of the in-
strument)!
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2. Safety
2.3.4 Handling microtome knives/blades
2.3.7 Defrosting/Handling frozen tissue
•
Danger!
-->Microtome knives and disposable blades
have extremely sharp cutting edges and
can cause serious injuries. Therefore:
•
Never leave specimens unattended in the
cryochamber over an extended period of
time!
•
•
Handle knives / blades with utmost care.
Never leave any knives / blades in unpro-
tected places!
Never place a knife, no matter where,
with the cutting edge facing upwards.
Never try to catch a falling knife.
Always insert the specimen before
inserting the knife.
-->In case of power failure or instrument
failure, or during the automatic defrost cy-
cle, tissue material can be destroyed.
During the defrost cycle the cryochamber is
partially warmed. - Therefore:
•
•
•
•
•
Remove sensitive specimens from the
chamber prior to defrosting.
•
If automatic defrosting is programmed to
take place during the night, remember to
remove all specimens from the cryo-
chamber prior to leaving work.
2.3.5 Knife guard/handwheel lock
•
Always cover the cutting edge with the knife
guard and lock the handwheel:
2.3.8 Frozen parts of the instrument and
frozen accessories
•
Prior to doing any work on knife and / or
specimen.
•
•
Prior to exchanging specimens.
During work breaks.
•
Prolonged contact of bare skin to frozen
surfaces of the instrument or to frozen
accessories (specimen discs, knife holder,
shelves etc.) can cause frostbite.
2.3.6 Motorized sectioning
•
Wear protective gloves.
•
Do not interrupt sectioning / trimming by set-
ting the sliding potentiometer to zero speed!
-->This does not really switch the sectioning
function off - it only operates at ‘0’ speed.
If the sliding potentiometer is accidental-
ly moved, the instrument will resume sec-
tioning immediately (risk of injury)!
•
During motorized sectioning, always center
the handwheel grip!
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2. Safety
2.3.9 Infectious/radioactive material
2.3.10 Disinfection and cleaning
•
Prior to disinfection, switch the instrument
off and unplug it from mains.
•
Danger!
Use caution when working with potentially
infectious specimens:
-->Risk of infection!
•
For removal of the microtome from the cryo-
chamber see chapter 2.3.11 ‘ Removing the
microtome’.
•
When working with potentially infectious /
radioactive specimens:
•
•
•
•
For disinfection, wear protective gear:
(gloves, mask, lab coat etc.)!
•
Wear protective clothes (gloves, protec-
tive boots, mask, lab coat), in compliance
with radiation safety regulations and/or
in-house regulations on handling infec-
tious / radioactive material.
For disinfection, only use alcohol-based dis-
infectants!
Do not use solvents (xylene, acetone etc.)
for cleaning or disinfection!
•
When working with radioactive specimens:
Do not spray disinfectants into the evapora-
tor!
-->Risk of icing!
•
Comply with applicable radiation safety
regulations!
•
Dispose of radioactive specimen waste ac-
cording to applicable regulations.
•
•
Explosion hazard when working with alcohol:
Make sure the premises are appropriately
ventilated!
When using disinfectants and detergents,
comply with all safety instructions supplied
by the manufacturer of the product!
•
Dispose of waste liquids from disinfection/
cleaning as well as of sectioning waste ac-
cording to applicable regulations on disposal
of special category waste!
•
•
Disinfected accessories must be thoroughly
dry when reinserting them into the chamber!
-->Risk of icing!
Make sure the chamber is completely dry
before switching the instrument back on:
-->Explosion hazard through alcohol vapors!
-->Risk of icing!
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2. Safety
2.3.11 Removing/reinstalling the
microtome
2.3.12 Display message ‘Dry microtome’
•
If the error message ‘Dry Microtome’ is dis-
played in control panel 1, the following has
happened:
•
•
•
•
Before removing the microtome:
Switch instrument off.
•
Cryochamber refrigeration has been in-
terrupted for an extended period of time
(e.g. power failure), causing the chamber
temperature to rise into the positive
digits.
Unplug from mains.
Place handwheel grip in lowest position and
lock.
-->When removing the microtome, the
specimen head must always be lok-
ked in the lowest position.
Otherwise the upper part of the slot
cover might be bent and consequently
damaged!
• If this message appears, do not switch on
the instrument but remove the microtome
from the chamber, disinfect, if necessary,
and dry thoroughly before reinstalling it
into the chamber (see chapter 7.1 to 7.5).
•
When removing the microtome:
2.3.13 Maintenance
•
Wear gloves when removing the micro-
tome while it is still frozen.
-->Risk of frost bite!
On instruments with specimen cooling:
do not distort the refrigerating tube!
If distorted it might break, causing ex-
•
Only technical service engineers authorized
by Leica may access the internal compo-
nents of the instrument for service and re-
pair.
•
•
The fluorescent light lamp (chamber illumi-
nation), unless broken or splintered, can be
replaced by the user:
tremely cold refrigerant to escape.
> Risk of frost bite!
- -
•
Before reinstalling the microtome:
•
•
•
Switch off mains switch!
•
Microtome must be completely dry.
>Humidity in the interior of the micro-
tome freezes and causes
--
Unplug the instrument from mains!
If the lamp is broken or splintered:
Have lamp replaced by Leica Technical
Service!
microtome malfunctions and/or
damage to the microtome.
-->Risk of injury!
•
Use only those replacement lamps that cor-
respond to technical specification (see
chapter 4.2 ‘Technical Data’).
•
All accessories/tools removed from the
cryochamber must be thoroughly dry be-
fore putting them back into the chamber!
-->Risk of icing!
Leica CM3050 S – Cryostat
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3. Installation
3.1 Site requirements
3.2 Unpacking and installation
Make sure to read and follow all
safety instructions in chapter 2.3.2
‘Site requirements’!
Unpacking instructions are always located in a
transparent protective envelope on the outside
of the instrument shipping crate.
3.1.1 General site requirements
Make sure to read and follow all
safety instructions provided in
chapter 2.3.1 ‘Transport’ and on the
unpacking instructions!
•
•
No direct sunlight.
Electrical power supply within distance
(length of power cord = approx. 4 meters -
do not use extension cords!).
3.2.1 Repacking
•
•
•
•
•
•
No draft (caused by air conditioning etc.).
Even floor surface.
We recommend to keep the original shipping
crate and the unpacking instructions for the
Leica CM3050 S.
Practically vibration-free floor.
Handwheel easily accessible.
For repacking, proceed as per unpacking in-
structions, in reverse order.
Room temperature constantly below +22 °C.
Relative humidity of air maximum 60 %.
Available models
High ambient temperature and/or high
air humidity negatively affect
instrument cooling performance!
•
•
•
Basic instrument
- with sectioning motor
- without specimen cooling
3.1.2 Electrical connections
Basic instrument
- without sectioning motor
- with specimen cooling
Make sure to read and follow all
safety instructions in chapter 2.3.3
‘Electrical connections’!
Basic instrument
- with sectioning motor
- with specimen cooling
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3. Installation
3.3 Standard delivery
1
1
1
1
1
Cryostat with microtome ............................................................................. 0460 32037
Handwheel with marking, antibacterial ...................................................0471 42558
Heat extractor, stationary...........................................................................0369 11197
Low-temperature stabilizer for heatextractor ........................................0452 27919
90° prism for direct specimen freezing on specimen head
with clamping screw to facilitate specimen trimming .......................... 0443 25949
Set of specimen discs .................................................................................0470 43550
- 4 Specimen discs, 25 mm .........................................................................0416 19275
- 4 Specimen discs, 30 mm .........................................................................0370 08587
Storage shelf, right ...................................................................................... 0443 25723
Storage shelf, left ......................................................................................... 0443 33549
Section waste tray .......................................................................................0400 26817
Foot switch with protective guard ............................................................0502 29977
Rubber mat .................................................................................................... 0443 25732
Freezing shelf cover ....................................................................................0443 30783
Brush shelf .................................................................................................... 0398 13088
Tool set........................................................................................................... 0436 43463
-1 Brush, fine ................................................................................................. 0183 28642
-1 Leica-brush ............................................................................................... 0183 30751
-1 Allen key, size 1.5 .....................................................................................0222 10050
-1 Allen key, size 2.5 .....................................................................................0222 04137
-1 Allen key, size 3.0 .....................................................................................0222 04138
-1 Allen key, size 4.0 .....................................................................................0222 04139
-1 Allen key with spherical head, size 4.0 ................................................0222 32131
-1 Allen key, size 5.0 .....................................................................................0222 04140
-1 Allen key with handle, size 5.0 ...............................................................0194 04760
-1 Allen key, size 6.0 .....................................................................................0222 04141
-1 Single-head wrench, size 13..................................................................0330 33149
-1 Single-head wrench, size 16..................................................................0330 18595
Bottle of OCT-Compound, mounting medium
1
1
1
1
1
1
1
1
1
1
for cryosectioning, 125 ml...........................................................................0201 08926
Bottle of cryostat oil, type 407, 50 ml ........................................................0336 06098
Pair of cut resistant gloves, size S ............................................................0340 40859
Instruction manual Leica CM3050 S - G/E/F/S ........................................0708 37109
1
1
1
In addition to the above:
Instruments with specimen cooling:
1
Configured instruments:
Instruments with sectioning motor:
1
90° Prism
for low temperature quick freezing
1
1
Knife holder base
Knife holder with accessories
Footswitch with
protective guard
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3.
Installation
In addition to the above:
•
Instruments with specimen cooling:
90° Prism for low temperature quick freezing
Configured instruments:
1
•
1
1
Knife holder base
Knife holder with accessories
•
Instruments with sectioning motor:
Footswitch with protective guard
1
Further accessories:
Further accessories which you ordered will be included in the box containing
the standard delivery items.
Knife holders are delivered with anti-roll guide, knife guard, and a
separate instruction manual.
In case of non-configured instruments, the knife holder is not a
part of standard delivery but must be ordered separately.
•
Check all delivered parts against the packing list and against your order
to verify whether the delivery is complete!
If there is any difference, contact your local Leica office immediately.
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3. Installation
3.4 Installing/inserting accessories
3.4.1 Installing the handwheel
3.4.2 Inserting the accessories
•
•
Place the rubber mat on top of the housing.
Insert the storage shelves into the cryo-
chamber.
•
Insert pin (1) of the handwheel shaft into
hole (2).
•
Install the stationary heat extractor into the
quick-freeze shelf (see also drawing in
chapter 5.5.1 ‘Freezing specimens onto
specimen discs’).
•
Place spring washer (3) onto screw (4) as
shown.
•
•
Tighten screw (4) with an Allen key.
Cover with selfadhesive disc (5).
•
Insert the low temperature stabilizer into the
quick freeze shelf (it must be located in the
pivoting range of the heat extractor - see
also drawing in chapter 5.5.1 ‘Freezing spec-
imens onto specimen discs’).
•
•
Insert section waste tray and brush shelf.
Install knife holder base onto microtome
base plate and clamp.
•
•
•
•
Install knife holder and clamp (see knife
holder instruction manual for details).
Place knife case with knife into chamber to
precool.
Place all tools needed for section prepara-
tion into the chamber.
For purposes of transport (e.g. narrow
doors), the handwheel can be
removed.
Close the sliding window.
For
individual parts:
--> see Chapter 4.1 ‘Overview’.
a
complete overview of all
•
To remove the handwheel, proceed as de-
scribed above but in reverse order.
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3. Installation
3.4.3 The footswitch
Connecting the footswitch
•
Insert footswitch into port (1) and secure.
1
Function
The footswitch performs the same task as the
RUN/STOP and RUN/ENABLE keys (activating/
deactivating motorized sectioning / trimming).
In addition, the footswitch can be used to acti-
vate the emergency stop function.
3.5 Prior to switching on the instrument
After transport, observe a waiting
period of at least 4 hours before
turning the instrument on! - See also
safety instructions in chapter 2.3.1
‘Transport’.
Models with footswitch:
Have you observed all safety
instructions in chapters 2.3.2 ‘Site
requirements’ and 2.3.3 ‘Electrical
connections’?
All instruments with sectioning motor.
If not:
--> Please read chapters 2.3.2 and
2.3.3!
Important note:
In all instrument models that are
delivered with footswitch, the
footswitch must be installed!
-
Otherwise the instruments are not
functional.
•
•
Insert mains plug into wall outlet.
Continue with chapter 5.1 ‘Setting up the in-
strument’.
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4. Instrument Properties
4.1 Overview
1
2
3
4
5
6
7
Cryostat CM3050S
Control panel 1
Control panel 2
Storage shelf, left
Storage shelf, right
Rubber mat
4
2
5
3
Mains switch /
Automatic cutout
for instrument,
Automatic cutout
for sectioning motor,
Footswitch port
Quick-freeze shelf
Stationary
6
8
9
heat extractor
10 Mobile heat extractor
11 Specimen disc
12 Thermoblock (optional)
13 Section waste tray
14 Brush shelf
9
10
15 Specimen head w/o
specimen cooling
16 Specimen head with
specimen cooling
(Option)
17 90° Prism
1
(instruments with
specimen cooling
only)
11
8
7
18 Knife holder base
19 Knife holder CE
20 Knife holder CN
21 Knife holder CS
22 Footswitch with
protective guard
12
22
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4. Instrument Properties
15
16
11
11
13
17
21
20
19
18
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4. Instrument properties
4.2 Technical Data
Operating temperature range (ambient temperature): + 18°C to + 40°C. All specifications related to tempe-
rature are valid only up to an ambient temperature of + 22°C and relative air humidity of less than 60%!
Type
CM3050S-10
CM3050S-1
CM3050S-8
CM3050S-9
Marks of conformity
Nominal voltage
Nominal frequency
Power draw
-
-
-
-
100 V AC 10% 230 V AC 10% 240 V AC 10% 100 V AC 10%
50 Hz
1800 VA
50 Hz
1800 VA
25 A eff.
I
50 Hz
1800 VA
25 A eff.
I
60 Hz
1800 VA
30 A eff.
I
Max. start-up current for 5 sec 35 A eff.
I
Protective fuse
Automatic cutout
T15A M3
2
T10A T1
2
T10A T1
2
T15A M3
2
Pollution degreeꢀ
Overvoltage installation category II
II
1800 J/s
II
1800 J/s
II
1800 J/s
Heat emission (max.)
1800 J/s
Refrigeration system
50 Hz
60 Hz
Cryochamber
Temperature selection range
Defrosting
0° C to -40°C (+ 2 K / - 0 K)
Automatic hot-gas defrost cycle,
0° C to -40°C (+2 K / - 0 K)
Automatic hot-gas defrost cycle,
programmable in 15-min. increments;
1 automatic defrost cycle per 24 hours.
Duration: 6 - 12 minutes
Manual defrost cycle
programmable in 15-min increments;
1 automatic defrost cycle per 24 hours.
Duration: 6 - 12 minutes
Manual defrost cycle
690 W
Refrigeration capacityꢀ
Safety factor
Refrigerant
690 W
3
3
280 g 5g refrigerant R 404A *
280 g 5g refrigerant R 404A*
Compressor oil
0.6 l EMKARATE RL-22S, ICI *
0.6 l EMKARATE RL-22S, ICI *
Quick-freeze shelf
Maximum temperature
Number of quick-freeze stations 10
- 43°C (+ 0 K / - 2 K)
- 43°C (+ 0 K / - 2 K)
10
Specimen cooling (Option)
Temperature range
Defrosting
Refrigeration capacityꢀ
Safety factor
-10° C to -50°C 3K
Manual defrost cycle (electric)
320 W
-10° C to -50°C 3K
Manual defrost cycle (electric)
320 W
3
3
Refrigerant
Compressor oil
185 g 5g refrigerant R 404A *
0.4 l alpha 22, Kyodo *
or RENISO E22, Fuchs *
185 g 5g refrigerant R 404A *
0.4 l alpha 22, Kyodo *
or RENISO E22, Fuchs *
Leica CM3050S – Cryostat
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4. Instrument properties
*) Refrigerant and compressor oil to be replaced only by trained and authorized service
personnel!
CM3050S-3
c-UL
120 V AC 10% 208 V AC 10% 230 V AC 10%
CM3050S-6
-
CM3050S-7
-
Microtome
Rotary microtome
Section thickness setting
Overall specimen feed
Vertical stroke
0.5 - 300 μm
25 mm
59 mm
60 Hz
1800 VA
35 A eff.
I
60 Hz
1800 VA
30 A eff.
I
60 Hz
1800 VA
25 A eff.
I
Specimen retraction
Maximum specimen size
Specimen orientation
50 μm
40 x 55 mm
8° (x-, y-, z-axis)
T15A T1
2
T12A T1
2
T10A T1
2
Trimming (6 thickness settings)
Motorized coarse feed
5 - 150 μm
II
1800 J/s
II
1800 J/s
II
1800 J/s
- slow
- fast
500 μm/s
1,000 μm/s
Sectioning motor (Option):
Sectioning speed
- slow
Fluorescent light lamp (cryochamber illumination):
min. 0.1 mm/s
max. 100 mm/s
50 Hz version:
60 Hz version:
Osram Dulux S 11 W/21
Light color ‘LUMILUX hellweiß’
v
min.
210 mm/s
0.1 mm/s
(brilliant white)
max
- fast
Osram Dulux S 13 W/21
Light color ‘LUMILUX hellweiß’
max. 170 mm/s
210 mm/s
v
(brilliant white)
max
Cryocabinet
Dimensions
according to IEC-1010, UL 3101
1
2
Width (w/o handwheel)
Width (including handwheel)
Depth
800 mm
882 mm
766 mm
840 mm
1040 mm
according to CECOMAF:
Liquid temperature 45°C
Evaporation temperature -25°C
Height (arm rest level)
Overall height
Weight
(incl. microtome, w/o specimen cooling)
ca. 180 kg
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5. Operation
5.1 Operating the instrument for the first time
Prior to setting up the instrument, make sure to read the instruction manual
carefully and in full.
When setting up the instrument, please follow the individual chapters in the
following order:
•
First, study chapters 1, 2, and 3 - install the instrument as described in
chapter 3.
The overview in chapter 4.1 is helpful during the unpacking and instal-
lation procedure in order to identify individual parts and place them in
the correct location.
•
•
Go on to chapter 5.
Read chapters 5.1, 5.2, 5.3 and 5.4 to learn all about the controls.
Next, start to work with the instrument (chapter 5.5). Follow the instruc-
tions in chapter 5.5.
Chapter 5.5.2 applies to instruments with specimen cooling only.
The temperature chart in chapter 6.3 is useful when it comes to select-
ing appropriate sectioning temperatures for different types of speci-
mens.
•
•
When disinfecting / cleaning the instrument and/or removing / rein-
stalling the microtome, please follow the instructions in chapter 7.
In case of problems and malfunctions, please refer to chapters 6.1 and
6.2. These chapters list the most common types of problems which
many times have simple causes that can be eliminated by the actual
user.
If you find ‘Call Technical Service’ in the ‘Remedy’ column, please do
so. Never try to solve these problems yourself!
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5. Operation
Automatic cutout for sectioning motor:
5.2 Switching on/fuses
The instrument is equipped with an automatic
cutout (2) for the sectioning motor.
If the sectioning motor is overloaded (e.g. when
sectioning extremely hard specimens etc.) the
automatic cutout (2) will be triggered.
To make the instrument functional again after
the automatic cutout (2) has been triggered:
2
(Automatic cutout
for sectioning
motor)
•
Push automatic cutout (2) inwards until it
locks into position.
1
(Combination Mains switch /
automatic cutout for the
instrument)
Switching on
•
To switch on the instrument, place switch (1)
in upper lock-in position.
Mains switch / automatic cutout for the
instrument:
In addition to its function as ON/OFF switch,
switch (1) is also the automatic cutout for the in-
strument.
If the automatic cutout has been triggered (e.g.
caused by overcurrent):
•
Put switch (1) back in upper lock-in position.
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5. Operation
5.3 Control panel 1
5.3.2 Display functions in control panel 1
5.3.1 Key functions in control panel 1
The display in control panel 1 combines several
different functions:
ON/OFF key for cryochamber illumination.
1. When switching the instrument on:
To select the menu items for setting /
changing instrument parameters.
A series of standard indications is displayed,
during which two basic parameters can be se-
lected (with the arrow keys):
Language (of display indications) and speed
level of sectioning motor.
See chapter 5.3.3 ‘Display indications when
switching on’.
In the status indication, pressing the ar-
row keys displays the individual current
parameters.
In the menu, pressing the arrow keys
changes set values.
2. Menu function (activated via menu key):
Via the menu key a number of parameters can
be selected, then be activated /deactivated via
the lock/unlock key and/or changed via the ar-
row keys.
As soon as a value is displayed, it is au-
tomatically stored.
Activates the manual defrost cycle (cry-
ochamber). This key is functional only
when one of the menu items ‘SET TEMP
CT ... °C’ or ‘SET TEMP OT ... °C’ (last
one only applies to instruments with
specimen cooling) has been selected
first.
See chapter 5.3.4 ’Menu functions: Setting param-
eters of refrigeration, time and preset counter’.
3. Status indication function:
The actual status of selected parameters is in-
dicated in the display screen.
Some of those parameters are displayed auto-
matically (e.g. sectioning stroke phase, coarse
feed position, handwheel locked).
Others can be displayed by pressing the arrow
keys; e.g. selected section thickness, preset
counter status etc.
See chapter 5.3.5 ‘Status indication’ and chap-
ter 5.3.6 ‘Displaying state of refrigeration, sec-
tion thickness and counters’.
Lock / unlock key:
- Locks the display to protect against
accidental changes of set parameters.
- Activates / deactivates a number of
functions.
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5. Operation
5.3.3 Display indications when switching on
Meaning of indication:
Operator activity:
---
Initialization phase 1
8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8
8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8
ꢀ
ꢀ
ꢀ
ꢀ
ꢀ
ꢀ
ꢀ
ꢀ
ꢀ
ꢀ
ꢀ
ꢀ
ꢀ
ꢀ
ꢀ
ꢀ
ꢀ
ꢀ
ꢀ
ꢀ
ꢀ
ꢀ
ꢀ
ꢀ
ꢀ
ꢀ
ꢀ
ꢀ
ꢀ
ꢀ
ꢀ
ꢀ
Initialization phase 2
---
C M 3 0 5 0 S
V s . X X . X X
Software version
---
E N G L I S H
Selected display language
Select language via
keys
C U T T I N G M O T O R
S L O W
Sectioning motor speed
level ‘slow’ / (fast)
Select speed level via
keys
Temperature prior to
switching off < 0 °C
yes
no
Temperature upon
switching on ≥ 0 °C
no
C T . . . . ° C
P O W E R
O T .
.
. . ° C * )
F A I L U R E
yes
Acknowledge indication by
pressing once briefly.
C T . . . . ° C
O T .
.
. . ° C * )
C T . . . . ° C
O T .
.
. . ° C * )
D R Y M I C R O T O M E
1 2 : 0 0
Standard indication ‘locked’ is displayed:
(Display background dark)
If this indication is displayed: Do not switch on
the instrument!
To unlock: press
ground lights up:
until the display back-
Prior to switching on, both microtome and
accessories must be completely dry!
Remove microtome/accessories, disinfect if
applicable, then dry thoroughly and reinstall.
(--> See chapters 7.1 - 7.5).
C T . . . . ° C
O T .
.
. . ° C
ꢀ
ꢀ
H O M E
❄ ❄
*) Indication in instruments with specimen cooling. Instruments without specimen cooling: only CT (centered) is displayed.
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5. Operation
5.3.4 Menu functions: setting parameters of refrigeration, time and preset counter
Once the instrument has gone through the initial
sequence of indications, you can go on to the
menu functions to select and/or change instru-
ment parameters.
1. Specimen temperature:
(instruments with specimen cooling only)
Press key until menu item ‘Set specimen
temperature’ is displayed:
If display is locked:
Press key until display background
lights up.
S E T
T E M P O T - - - ° C
- -
Press key briefly.
The line in the specimen temperature
field is replaced by an asterisk.
Next, press the menu key. With each key stroke
the following parameters will be displayed (dis-
play sequence as listed):
S E T
T E M P O T - - - ° C
- ❄
1. Specimen temperature
(in instruments with specimen cooling only)
(-10 - -50 °C)
From this point on the refrigeration sys-
tem is activated and the desired set
temperature can be selected with one
of the arrow keys.
2. Cryochamber temperature
(0 - -40 °C)
Press arrow key and release upon
reaching the desired value.
3. Selected number of sections - preset
counter
(ON/OFF and setting selection from 1 to 999)
C T . . . . ° C
H O M E
O T - 3 5 ° C
ꢀ
ꢀ
- ❄
4. Maximum specimen temperature
(ON/OFF)
Note on the arrow key function:
Each time one of the arrow keys is pressed
briefly, the value displayed in the menu will be
changed one step up or down.
If an arrow key is pressed and held, the value
will change continually (auto-repeat function).
When holding the key, scrolling speed will in-
crease after a while.
5. Real time
(in 1-minute steps)
6. Defrost time (starting time of automatic
cryochamber defrosting)
(in 15-minute steps)
7. Duration of defrost cycle
(cryochamber defrosting)
(6 to 12 minutes duration)
As soon as a value is displayed, it is at the same
time automatically stored.
Menu items 5 and 6 displayed on 24 hour clock.
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5. Operation
Now there are two options:
1. Increase or decrease the actual reference
value by pressing or
2. Press and simultaneously in order to
2. Cryochamber temperature:
Press key until menu item ‘Set chamber
temperature’ is displayed:
.
--> Continue as described for
specimen temperature.
reload the former reference value (‘0’ when
setting up the instrument) and then press ei-
3. Preset counter
(instruments with sectioning motor only):
ther
or
individually in order to select
the desired reference value. Depending on
where you start from and where you want to
go, method 1 or method 2 is quicker (see ex-
amples).
Press key until menu item ‘Preset
counter’ is displayed:
P R E S E T
C O U N T E R
d n - - -
Example 1:
= Preset counter activated
P R E S E T
C O U N T E R
d n 0 5 6
Actual preset counter reading = 50
Former reference value = 300
New reference value of 65 to be selected.
= Preset counter deactivated
Method 1 is most convenient:
Preset counter function:
•
Increase from 50 to 65 by pressing
.
The preset counter allows the user to carry out
a predefined number of sections in the ‘Continu-
ous stroke’ sectioning mode.
Example 2:
Once the preselected number of sections has
been carried out (= section counter reading ‘0’),
the specimen head will stop automatically in the
lower limit position.
Actual preset counter reading = 50
Former reference value = 300
New reference value of 320 to be selected.
Method 2 is most convenient:
The reference value (i.e. the value from which
the preset counter counts downward) can be
selected in the corresponding menu item.
•
Press
reload old reference value (300):
• Increase from 300 to 320 by pressing
and
simultaneously to
.
In order to be able to set a reference value, the
preset counter function must be active.
For further information on the preset counter,
please refer to chapter 5.3.6, Item 4 ‘Preset
counter’.
If the preset counter is deactivated (see diagrams
above), press
to activate.
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5. Operation
The automatic defrost cycle takes place once
every 24 hours at the selected defrost time.
4. Quick-freezing at maximum specimen
temperature* (instruments with specimen
cooling only)
7. Duration of defrost cycle:
Press key until menu item ‘Fast object
freezing’ is displayed:
Press key until menu item ‘Defrost period’
is displayed:
F A S T
O B J
O F F
F R E E Z I N
D E F R O S T
P E R I O D
C H A M B E R :
0 8
M I N
or
F A S T
O B J
O N
F R E E Z I N
•
Use defrost keys (
or
) to adjust de-
frost time. (Only if necessary - see below).
Press lock/unlock key to activate or de-
activate (ON/OFF).
Important information for setting the
defrost parameters
Starting time of defrost cycle:
5. Real time
We recommend to program the
automatic defrost cycle for a time out-
side regular working hours as a
period of 4 hours should pass after the
defrost cycle before work with the
instrument is resumed (see also
chapter 5.7.1 ‘Automatic chamber
defrost cycle’).
Press key until menu item ‘Time’ is dis-
played:
T I M E
1 0 : 2 3
•
Use arrow keys (
or
) to set real time.
Setting minutes as well as hours in
1-minute steps. Holding arrow button in-
creases scrolling speed!
Defrost cycle duration:
The duration of the chamber defrost
cycle is set to 8 minutes in factory.
This setting should only be
changed, if the evaporator is not
completely de-iced during the
8-minute cycle.
In such cases, increase the defrost
cycle duration gradually until the the
evaporator is ice-free after defrosting.
The selected defrost cycle duration is
valid for both automatic and
manual chamber defrost cycle.
6. Starting time of automatic defrost cycle:
Press key until menu item ‘Defrost time’ is
displayed:
D E F R
T I M E
4 : 3 0
(Time on display = start time of defrost
cycle)
•
Use arrow keys (
sired defrost start time.
or
) to select the de-
*) with 90° prism - see also chapter 5.5.2.
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5. Operation
5.3.5 Status display
Each individual parameter is displayed in a certain area of the display screen.
Upper line:
In the menu (see chapter 5.3.4): indication of selected menu item.
Standard indication: Chamber temperature (instruments with specimen cooling: chamber and specimen temperature)
Standard indication upper line:
Instruments with chamber and specimen cooling
Instruments with chamber cooling only
C T - 3 0 ° C
C T - 3 0 ° C
H O M E
O T - 3 5 ° C
ꢀꢀ
ꢀ
ꢀ
H O M E
ꢀ -
ꢀ
ꢀ
Upper line
Lower line
1
1
2
2
3
3
4
4
5
5
6
6
7
7
8
8
9
9
1 0 1 1 1 2 1 3 1 4 1 5 1 6
1 0 1 1 1 2 1 3 1 4 1 5 1 6
Digits 1 and 2
indicate sectioning stroke position:
Digits 3 - 6
Digits 7 - 16
indicate coarse feed position:
indicate the following parameters:
•
Sectioning stroke
(outside sectioning window)
• Rear limit position:
• Front limit position:
HOME
STOP
• Refrigeration status:
Digit 15 = cryochamber
Digit 16 = specimen
Meaning of
•
ꢀ
:
Retraction stroke
Indication of ‘malfunction’ or
‘handwheel locked’:
-
Refrigeration OFF
• [ ]:
Sectioning stroke
refrigeration
symbols:
(inside sectioning window)
• Microtome plug loose,
implausible values etc.:
ꢀ
Refrigeration ON
Defrosting active
????
Sectioning
stroke
ꢀ
• Handwheel is locked:
LOCKED
• Section thickness
(set value)
Indication ‘LOCKED’ completely
overlays digits 3 through 16,
Sectioning window [
]
i.e. while ‘LOCKED’ is displayed, no
other parameters will be displayed
in digits 3 - 16 of the lower line.
• Section counter
(actual value)
• Indication of total section thickness
(actual value)
• Further indications: see chapter 6.1
‘Error messages indicated in the
display screen’
ꢀꢀ
Retraction stroke
• Preset counter
Digits 7 - 16:
Scroll via arrow buttons to display
individual parameters
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5. Operation
5.3.6 Indication of refrigeration state, section thickness setting and counters
These parameters can be displayed via the ar-
row keys.
4. Total section thickness counter
C T - 3 0 ° C
O T - 3 5 ° C
∑ μ 0 0 0 0 . 0
When pressing
played in the sequence listed on this page;
when pressing , they are displayed in re-
, the parameters are dis-
Can also be set to ‘0’ at any time (via
key).
verse order. The display can be scrolled contin-
uously, i.e. after the last parameter the display
will automatically start again with the first.
If the total section thickness indication is not set to
‘0’ manually, the instrument counts up to maximum
9999.5 μm at which point the counter will automati-
cally switch back to ‘0’.
This indication shows the total thickness of all
sections carried out since the counter was last
set to ‘0’. (All sections, in sectioning and trim-
ming mode, are counted).
1. Refrigeration state
C T - 3 0 ° C
H O M E
O T - 3 5 ° C
ꢀ
ꢀ
ꢀꢀ
Meaning of the refrigeration symbols (asterisks):
--> see chapter 5.3.5 ‘Status indication’.
5. Preset counter
C T - 3 0 ° C
O T - 3 5 ° C
d n 0 5 6
2. Section thickness
C T - 3 0 ° C
O T - 3 5 ° C
μ 0 1 0 . 0
Setting preset counter to ‘0’:
Press
key.
The sectioning thickness is set with the
key (see chapter 5.4.7 ‘Setting the section
thickness’).
or
can also be pressed while the continuous
sectioning mode is in motion; in this case the
preset counter is set to ‘0’ and sectioning stops
upon reaching the lower limit position.
After it has been set to ‘0’, the preset counter is
inactive.
3. Section counter
C T - 3 0 ° C
O T - 3 5 ° C
∑ n 0 0 0
Reloading the former reference value:
Once displayed (via arrow keys), the section
counter can be set to ‘0’ at any time.
Press
and
simultaneously.
Reloading the former reference value is possible
also while the continuous sectioning mode is in
motion:
Upon pressing both arrow keys, the instrument
continues sectioning without interruption, start-
ing to count down from the old reference value.
•
To set to ‘0’ press
.
If the section counter is not set to ‘0’ by the user
at some point, sections are counted up to ‘999’
at which point the counter automatically
switches back to ‘0’.
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5. Operation
5.4 Control panel 2
Instruments without sectioning motor
Instruments with sectioning motor
In instruments without sec-
tioning motor, control panel
2 only consists of functional
area B (see below)
In instruments with section-
ing motor, the control panel
is equipped with three func-
tional areas: A, B and C (see
large diagram).
A
Functional area A:
• Sectioning modes
• Sectioning window
• Sectioning speed
• Emergency stop function
B
Functional area B:
• Coarse feed
• Trimming
B
Functional area B:
• Coarse feed
• Trimming
• Section thickness selection
• Section thickness selection
C
• Start / Stop sectioning
Functional area C:
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5. Operation
Functional areas A and C - Instruments with sectioning motor only
5.4.1 Selecting a sectioning mode /
start and stop sectioning
Start / stop motorized sectioning
Sectioning mode 1 - Intermittent stroke:
Three different sectioning modes can be select-
ed for motorized sectioning:
•
•
Simultaneously press and hold RUN/STOP and
RUN/ENABLE or depress and hold footswitch.
To stop the sectioning stroke, release the
keys or the footswitch:
Sectioning mode 1 - Intermittent stroke:
The specimen head travels up and
down as long as the RUN/STOP and
RUN/ENABLE keys are pressed simulta-
neously or as long as the footswitch is
depressed.
The specimen head stops immediately.
Sectioning mode 2 - Continuous stroke:
•
Simultaneously press and release RUN/STOP
and RUN/ENABLE or depress and release
footswitch.
Sectioning mode 2 - Continuous stroke:
The specimen head travels up and down
until it is stopped by pressing RUN/STOP
or RUN/ENABLE or by depressing the
footswitch.
•
To stop sectioning:
Press and release RUN/STOP or RUN/EN-
ABLE or depress and release the footswitch:
The specimen head stops upon reaching the
lower limit position.
Sectioning mode 3 - Single stroke:
The specimen head carries out one sec-
tioning stroke and then stops in the low-
er limit position.
Sectioning mode 3 - Single stroke:
•
Simultaneously press and release RUN/STOP
and RUN/ENABLE or depress and release
footswitch.
Activating a sectioning mode
•
The instrument carries out one complete
section / retraction stroke and the specimen
head stops upon reaching the lower limit po-
sition.
Press one of the three sectioning mode keys de-
scribed above. While a sectioning mode is ac-
tive, the LED in the corresponding key will be il-
luminated.
While sectioning is in motion, LED ‘RUN’ is illu-
minated.
While the sectioning motor is deactivated, LED
‘STOP’ is illuminated.
Both LEDs are located in functional area C.
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5. Operation
Functional areas A and C - Instruments with sectioning motor only
The value has been stored when the LED in the
sectioning window key lights up briefly.
5.4.2 Setting the sectioning window
The term ‘Sectioning window’ stands for a dif-
ferent (slower) speed setting in that part of the
sectioning stroke where the specimen is actual-
ly cut, while the remaining sectioning stroke
(above and below the specimen) as well as the
retraction (return) stroke are carried out at a
higher speed level (time-saving feature).
If the LED flashes, the value has not yet been
stored, because the user has tried to set a win-
dow margin outside the possible window range
(the area in which the sectioning window can
be set is slightly smaller than the total section
stroke).
• In that case, repeat the step in question.
.
If a sectioning window is set, speed inside the
window is as set on the control panel. Outside
the sectioning window the specimen head trav-
els at a proportionately higher speed.
The sectioning window cannot be
deleted. If need be, it can be set to
maximum size (i.e. almost the en-
tire sectioning stroke will be car-
ried out at one and the same
speed).
Always set the sectioning window
while in the sectioning stroke (speci-
men moves downward). Setting the
window in retraction stroke (speci-
men travels upward) is not possible.
Every time after the instrument is
disconnected from mains, the sec-
tioning window is set to maximum
size upon switching back on. This
also applies when the instrument is
switched on for the first time.
•
•
Position lower edge of specimen approx.
3 mm above the knife edge (rotate hand-
wheel clockwise).
Press sectioning window key.
Position upper edge of specimen just below
the knife edge (continue to rotate the hand-
wheel clockwise).
Press sectioning window key once
more.
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5. Operation
Functional areas A and C - Instruments with sectioning motor only
5.4.4 Emergency stop
5.4.3 Selecting sectioning speed
•
Activate by:
•
•
Sectioning speed is selected via the sliding
potentiometer. Speed can be changed while
sectioning is in motion.
either pressing the emergency stop
button forcefully (must lock in
position),
•
or depressing the footswitch force-
fully.
Either way, sectioning is interrupted at once.
Caution when working in continuous mode:
If the slider is set to ‘0’, the sectioning motion
stops, however, the actual sectioning mode is
still active - just operating at ‘0’ speed.
In both cases, the red LED in functional
area A lights up, indicating that the emergency
stop function has been activated. Simultaneously
3
(= all 3 LEDs off).
If the slider is accidentally moved, sectioning
will be resumed! - Risk of injury!
all
sectioning modes are deactivated
Therefore:
•
To deactivate the emergency stop function,
rotate the button in the direction of the ar-
row until it unlocks and slips upward into its
original position.
Do not interrupt sectioning / trim-
ming by setting the sliding potenti-
ometer to zero speed!
As soon as the emergency stop button has been
unlocked, the red LED is extinguished.
See also safety instruction in Chap-
ter 2.3.6 ‘Motorized sectioning’.
•
If the emergency stop function has been ac-
tivated with the footswitch, unlocking is not
necessary.
Vmax key
As soon as the footswitch is released, the red
LED is extinguished.
As long as the button is pressed, the
sectioning motion is carried out at maxi-
mum speed (210 mm/s).
•
To continue work, select one of sectioning
modes 1 - 3 and restart the sectioning
motion.
While Vmax is active, the sectioning window is
inactive.
See also chapter 2.2.3 ‘Safety - Emergency stop
function’ for further information on the emer-
gency stop.
When the Vmax key is released, the sectioning
window becomes active again.
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5. Operation
Functional area B - all models
Coarse feed ‘fast forward’
- Travelling speed 1,000 μm/s
5.4.5 Coarse feed keys
The four coarse feed keys in functional area B
function as follows:
•
To activate the function, press
and hold.
The specimen head travels forward (= to-
wards the knife) as long as the key is held.
Coarse feed ‘fast backward’
- Travelling speed 1,000 μm/s
Coarse feed ‘slow forward’
- Travelling speed 500 μm/s
•
Press
key to activate.
Specimen head travels backward
(= away from knife):
•
To activate the function, press
and hold.
a. until it reaches the rear limit position,
The specimen head travels forward
(= towards the knife) as long as the key is
held.
b. until it is stopped by pressing one of the
coarse feed keys (to stop the function, any
of the four coarse feed keys can be
pressed).
‘STOP’-LED (located in key
‘Coarse feed fast forward’)
Coarse feed ‘slow backward’
- Travelling speed 500 μm/s
As long as the forward coarse feed (both fast
and slow) is in motion, the ‘STOP’ LED is illumi-
nated.
•
To start, press
and hold.
Specimen head travels backward (= away
from knife) as long as the key is held.
Upon reaching the front limit position, the
‘STOP’ LED starts flashing and the display in
control panel 1 reads ‘STOP’.
LED ‘HOME’ (located in key
‘Coarse feed fast backward’)
As long as the backward coarse feed (both fast
and slow) is in motion, the ‘HOME’ LED is
illuminated.
Upon reaching the rear limit position, the
‘HOME’ LED starts flashing and the display in
control panel 1 reads ‘HOME’.
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5. Operation
Functional area B - all models
5.4.7 Setting the section thickness
5.4.6 Trimming and sectioning functions
Switching between trimming
and sectioning
•
Activate sectioning mode (
off).
C T . . . . ° C
O T . .
μ 0 1 0 . 0
. . ° C
Press this key to alternate between the
two functions.
•
Press
or
to select section thickness.
illuminated:
Trimming mode is active
Pressing one of these keys once makes the
display in control panel 1 switch to section
thickness indication (thickness value not yet
off:
Sectioning mode is active.
being altered). Pressing
or
further
starts to change the actual section thick-
ness setting.
Selecting trimming thickness
•
•
Activate trimming mode
Select trimming thickness (= sectioning
thickness at which trimming is carried out)
Selectable section thickness settings:
0
2
-
-
-
-
2 μm in 0.5-μm steps,
by pressing
or
.
10 μm in 1-μm
20 μm in 2-μm
60 μm in 5-μm
steps,
steps,
steps,
steps,
steps.
10
20
The selected thickness is displayed in the cor-
responding LED
:
60 - 100 μm in 10-μm
100 - 300 μm in 50-μm
Motorized trimming
•
Select ‘Continuous stroke’ in functional area
A.
•
Activate trimming by pressing RUN/STOP
and RUN/ENABLE (located in functional
area C) simultaneously or by depressing the
footswitch.
•
To stop trimming press RUN/STOP or RUN/
ENABLE or depress the footswitch again.
Trimming thickness can be changed while trim-
ming is in motion by pressing
or
.
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5. Operation
5.5 Daily operation of the instrument
5.5.1 Freezing specimens onto specimen
discs with quick-freeze shelf and
stationary heat extractor
•
Select chamber temperature and, in instru-
ments with specimen cooling, specimen
temperature according to the type of speci-
men to be sectioned (see also chapter 6.3
‘Reference chart for temperature settings’).
Do not continue with step 5.5.1 before the
actual chamber / (specimen) temperature
corresponds to the set value. This may take
several hours (e.g. when operating the in-
strument for the first time or when the instru-
ment had been switched off).
•
•
Size the specimen.
Apply sufficient amount of embedding medi-
um onto ambient temperature specimen
disc.
•
•
•
Inside the cryochamber, place the specimen
onto the disc and orient.
Place specimen disc with specimen into one
of the 10 openings in the quick-freeze shelf
(see below) and freeze.
Prior to operating the instrument ,
please read and observe the fol-
lowing safety instructions:
•
•
‘Integrated safety devices’
(Chapter 2.2) .
‘Handling microtome knives
/ blades’
(Chapter 2.3.4)
2
1
•
‘Knife guard /
Handwheel lock’
(Chapter 2.3.5)
3
•
•
’Motorized sectioning’
(Chapter 2.3.6)
The freezing process can be sped up further by
using the stationary heat extractor (1). Next to
the low temperature stabilizer (2) (‘Parking
station’), 3 specimen discs (3) can be placed
within its pivoting range.
‘Defrosting
/ handling frozen tissue’
(Chapter 2.3.7)
•
•
‘Frozen instrument parts
and accessories’
(Chapter 2.3.8)
•
Place the heat extractor (1) directly onto the
specimen surface. After approx. 30 seconds
the specimen is completely frozen.
‘Infectious / radioactive material’
(Chapter 2.3.9)
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5. Operation
The specimen head is now automatically cooled
down to the lowest temperature (-50 °C).
5.5.2 Freezing specimens onto specimen
discs with 90 ° prism
(Instruments w/specimen cooling only)
•
Once the specimen is frozen, remove the
disc from the prism and store it in the quick-
freeze shelf until inserting it into the speci-
men head.
In instruments with specimen cooling, the 90 °
prism, which is inserted into the specimen head,
is an additional option to freeze specimens at
maximum temperature .
•
Press
Object Freezing’ and deactivate the function
by pressing once again (see chapter
5.3.4 ‘Menu functions’ item 4).
again to activate menu item ‘Fast
4
The specimen head temperature now automati-
cally returns to the previously selected set val-
ue.
•
Loosen screw (3) at specimen head and re-
move prism (1).
Installing the 90 ° prism
•
Store prism inside the cryochamber.
•
•
Loosen screw (3) at specimen head.
Insert pin (1) of prism completely into recep-
tacle (2) in the specimen head.
5.5.3 Optional accessories for freezing
specimens onto specimen discs
and for removing frozen specimens
Important: the entire rear surface of the
prism must fit tightly against the specimen
head surface!
Mobile heat extractor
•
Retighten screw (3) at specimen head.
In addition to the stationary heat extractor (part
of standard delivery), a mobile heat extractor is
available as an optional accessory - see Ap-
pendix ‘Ordering information - accessories ):
The prism now forms a horizontal surface for
quick specimen freezing.
Freezing specimens with the 90 ° prism
•
Apply sufficient amount of embedding medi-
um onto ambient temperature specimen disc,
add specimen and orient.
•
•
Insert specimen disc with specimen into the
receptacle (4) of the prism.
Press to activate menu item ‘Fast Object
Freezing’ and activate function by pressing
•
•
•
Store heat extractor in chamber to precool.
Place onto specimen in quick-freeze shelf.
Remove as soon as specimen is frozen.
(see chapter 5.3.4 ‘Menu functions’ item 4).
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5. Operation
5.5.4 Inserting specimen discs into the
specimen head
Thermoblock
The thermoblock makes it easy to remove fro-
zen specimens from the specimen discs.
•
Lock handwheel in upper position.
If a knife has already been inserted
into the knife holder, cover knife
edge with knife guard!
Do not store the thermoblock inside
the cryochamber - store at room
temperature and only place into the
chamber for removing specimens
from discs.
•
Place cap (9) on one of the two ends so that
the correct size opening (7) for the disc to be
inserted is exposed.
•
•
Loosen clamping screw (3).
Insert specimen disc in opening (2) (rear
surface of specimen disc must fit tightly
against surface of specimen head).
•
•
Insert pin (6) of specimen disc (5) into the
opening (7).
After about 20 seconds remove the frozen
specimen from the specimen disc (use
tweezers).
•
Tighten clamping screw (3).
•
•
If cap (9) fits too loosely, readjust with
screw (10). Do not tighten screw too much!
Once the specimen has been detached from
the disc, remove the thermoblock from the
cryochamber.
5.5.5 Specimen orientation
•
•
Open clamping lever (4) --> (4a).
Orient specimen via orienting screws (1)
and (5).
•
Retighten clamping lever (4).
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5. Operation
5.5.6 Trimming / sectioning
Inserting the knife
•
•
Use motorized coarse feed to bring speci-
men close to knife (see chapter 5.4.5 ‘Coarse
feed functions’).
Move anti-roll plate away from knife.
•
Insert the knife / disposable blade into the
knife holder.
-->Next steps: see chapter 5.4.6 ‘Trimming’.
•
Select appropriate clearance angle at knife
holder (settings between 4° and 6° are suit-
able for the majority of applications).
Sectioning
•
Adjust knife / knife holder relative to speci-
men (see ‘Knife holder’ instruction manual).
For details on how to insert and ad-
just the knives, please refer to the
separate instruction manual(s) for
your knife holder(s).
See also chapter 2.2 ‘Integrated
safety devices’ incl. subchapter
2.2.4 ‘Knife guard’.
•
•
Place anti-roll guide onto knife.
Orient specimen, if necessary (see chapter
5.5.5 ‘Specimen orientation’).
•
Select desired section thickness (see chap-
ter 5.4.7 ‘Setting the section thickness’).
•
Start sectioning at approx. 20 μm, reduce
section thickness gradually until reaching
the appropriate thickness for the type of
specimen to be sectioned.
Manual trimming
•
Adjust knife / knife holder relative to speci-
men (see ‘Knife holder’ instruction manual).
•
Discard the first 2 to 3 sections cut at the de-
sired section thickness.
•
•
Unlock handwheel.
Use motorized coarse feed to bring speci-
men close to knife (see chapter 5.4.5 ‘Coarse
feed functions’).
When sectioning manually, rotate the hand-
wheel evenly and at uniform speed.
•
Select desired section thickness (see chap-
ter 5.4.7 ‘Setting the section thickness’).
For all details on motorized sectioning, please
refer to chapters 5.4.1 to 5.4.4:
•
•
Move anti-roll plate away from knife.
‘Selecting a sectioning mode / Start and stop
sectioning’, ‘Setting the sectioning window’,
‘Selecting sectioning speed’, ‘Emergency stop’.
Rotate handwheel to trim specimen down to
desired sectioning plane.
Motorized trimming
For advice on appropriate Sectioning tempera-
tures for different types of tissue, please refer to
chapter 6.3 ‘Reference chart for temperature
settings’.
•
Adjust knife / knife holder relative to speci-
men (see ‘Knife holder’ instruction manual).
•
Unlock handwheel.
•
Center handwheel grip (See chapter 2.2.2).
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5. Operation
5.6 Finishing work
5.6.2 Switching off the instrument for a
longer period of time
5.6.1 Daily routine steps
If you do not plan to use the instrument for an
extended period of time, it can be switched off.
Remove all specimens from the cry-
ochamber and store safely! See
also corresponding safety instruc-
tions in chapter 2.3.7 ‘Defrosting /
handling frozen tissue’!
However, since this involves a lot of work (see
below), it should be considered carefully
whether switching off the instrument is really
the better option.
•
•
Lock handwheel.
If the instrument is switched off, the microtome
must be removed. Then the microtome, cryo-
chamber and all accessories must be disinfect-
ed and dried!
Remove knife from knife holder, disinfect,
dry (see chapter 7 ‘Disinfection, cleaning
and maintenance’) and store in the knife
case.
•
•
Use a cold brush to sweep frozen sectioning
waste into the section waste tray.
•
For that purpose, follow the instructions in
chapters 7.1 through 7.5.3.
Empty section waste tray (dispose of sec-
tioning waste according to the applicable
regulations on disposal of special category
waste!).
•
•
If necessary, carry out a complete disinfection
procedure (see chapter
cleaning and maintenance’).
7
‘Disinfection,
Remove all specimens from the chamber
and store safely.
•
•
•
Close sliding window.
Switch off cryochamber illumination.
Use lock/unlock key to lock display in control
panel 1 (Display background dark = locked):
C T . . . . ° C
O T .
.
. . ° C
1 2 : 0 0
Do not switch off mains switch /
automatic cutout (see chapter 5.2
‘Switching on / fuses’)!
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5. Operation
The specimen head refrigeration is automatical-
ly switched back on when:
5.7 Defrosting
The Leica CM3050 S has 3 (instruments without
specimen cooling: 2) different defrosting options.
•
at least 4 hours have passed since the de-
frost cycle was completed;
•
and the actual chamber temperature devi-
ates less than 5 K from set value.
-
-
-
Automatic chamber defrost cycle
Manual chamber defrost cycle
After the specimen head refrigeration has been
switched back on, the specimen head tempera-
ture rises briefly to +10 °C and then decreases
until it reaches the set value.
Specimen head defrosting (manual) - instru-
ments with specimen cooling only.
Read the safety instructions in chap-
ter 2.3.7 ‘Defrosting / frozen speci-
mens’ !
Switching specimen cooling back on immedi-
ately after defrosting:
As soon as the chamber defrost cycle is com-
pleted, specimen cooling can be switched back
on immediately:
Make sure to remove sensitive speci-
mens from the cryochamber before
the defrost cycle starts!
•
•
Press
temperature’ is displayed:
until menu item ‘Set specimen
5.7.1 Automatic chamber defrost cycle
S E T
T E M P O T - 3 5 ° C
The automatic defrost cycle is carried out once
every 24 hours at the preselected time.
(For details see chapter 5.3.4 ‘Menu functions’ -
items 6 and 7).
ꢀ -
Press
.
S E T
T E M P O T - 3 5 ° C
ꢀꢀ
During the defrost cycle, the corresponding as-
terisk is displayed inversely:
Specimen cooling is switched back on.
Despite the possibility of switching
the specimen cooling system back
on immediately after the automatic
chamber defrost cycle, we recom-
mend the automatic defrost cycle
be set at a point in time when the
entire procedure can be controlled
automatically.
C T - 3 0 ° C
H O M E
O T - 3 5 ° C
ꢀ
ꢀ
ꢀꢀ
Once the defrost cycle is finished, the instrument
automatically switches back to refrigeration.
Instruments with specimen cooling:
When defrosting starts, to avoid icing the speci-
men head is automatically adjusted to a temper-
ature between -10 °C and -5 °C, i.e. the set tem-
perature value is deactivated temporarily.
(See also information on menu
items 6 and 7 in chapter 5.3.4 ‘Menu
functions’).
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5. Operation
5.7.2 Manual chamber defrost cycle
5.7.3 Defrosting the specimen head
(instruments with specimen cooling
only)
In addition to the automatic defrost cycle, a
manual chamber defrost cycle can be activat-
ed when necessary.
To activate specimen head defrosting:
•
Press
until menu item ‘Set specimen
•
•
Press
until menu item ‘Set chamber
temperature’ is displayed:
temperature’ is displayed:
S E T
T E M P O T - 3 5 ° C
ꢀꢀ
S E T
T E M P
C T - 3 0 ° C
ꢀ -
•
Press
. A brief sound signals that the
Press
. A brief sound signals that the
manual chamber defrost cycle has started:
manual chamber defrost cycle has started:
S E T
T E M P O T - 3 5 ° C
S E T
T E M P
C T - 3 0 ° C
ꢀꢀ
ꢀ -
Specimen head temperature increases to be-
tween +20 °C and +30 °C for a duration of 10
minutes, after which it returns to the set value.
The manual defrost cycle ends either when the
selected defrost cycle duration is over or when
a chamber temperature of -5 °C is reached.
To abort the manual defrost cycle:
To abort specimen head defrosting:
•
Go back to menu item ‘Set chamber tem-
perature’ and press again.
•
Press
until menu item ‘Set specimen
temperature’ is displayed and press
once more.
Instruments with specimen cooling:
When defrosting starts, to avoid icing the spec-
imen head is automatically adjusted to a tem-
perature between -10 °C and -5 °C, i.e. the set
temperature value is deactivated temporarily.
(same as with automatic defrost cycle - see
chapter 5.7.1 ‘Automatic chamber defrost cy-
cle’)
10 seconds after the manual chamber defrost cy-
cle has been completed, the specimen head re-
frigeration is switched back on, cooling down to
the set value.
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6. Troubleshooting, applications tips
6.1 Displayed error messages
4. Service
The autodiagnosis function of the CM3050 S
displays error messages in case of certain mal-
functions.
C T - 3 0 ° C
O T - 3 5 ° C
S E R V I C E
This message is displayed after a
certain number of operating hours
to remind the user to have a preven-
tive maintenance done by Leica
Technical Service.
This message is displayed only, if
the instrument is not regularly ser-
viced by Leica Technical Service.
1. Power failure
This error message is displayed after the instru-
ment had been disconnected from mains, either
due to power failure or because the mains
switch had been turned off.
C T - 3 0 ° C
P O W E R
O T - 3 5 ° C
F A I L U R E
We recommend
contract once the warranty period
has expired!
a
maintenance
•
To acknowledge the message, press
about 5 seconds.
for
2. Coarse feed
Contact your local Leica sales
office for details!
Coarse feed malfunction has occurred.
C T - 3 0 ° C
? ? ? ?
O T - 3 5 ° C
If one of the error messages listed
under 2, 3 and 4 is displayed, please
contact Leica Technical Service.
This message is also displayed, if the coarse
feed plug has not been reconnected properly
after reinstallation of the microtome.
6.1.1 Other error indications
3. Temperature indications
(red ) in control panel 2 is illuminated:
C T - # # ° C
O T - 3 5 ° C
•
•
Emergency stop button accidentally activat-
ed.
--> Unlock.
or
C T - 3 0 ° C
O T - # # ° C
Footswitch not properly connected.
--> Check connection - connect properly,
if applicable.
If the # symbol is displayed instead of chamber
or specimen temperature indication, the corre-
sponding temperature sensor is broken or a
short circuit has occurred.
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6. Troubleshooting, applications tips
6.2 Potential problems - causes and remedies
Problem
Causes
Remedies
Frost on chamber walls and
microtome
- Cryostat is exposed to draft
(open windows, doors, air-
conditioning).
- Eliminate draft sources or
change place of installation of
the cryostat.
- Sliding window has been open
for a long period of time at a
very low chamber temperature.
- Frost build-up caused by
breathing into the cryocham-
ber.
- Close sliding window.
- Consider wearing a mask.
Sections smear
- Specimen not cold enough.
- Knife and/or anti-roll plate not
yet cold enough - sections
melt.
- Select lower temperature.
- Wait until knife and/or anti-roll
plate have reached chamber
temperature.
Sections splinter
Sections not properly flattened
- Specimen too cold.
- Select higher temperature.
- Eliminate cause.
- Static electricity / draft.
- Specimen not cold enough.
- Large surface specimen.
- Select lower temperature.
- Trim specimen parallel; in-
crease section thickness.
- Readjust anti-roll plate.
- Align correctly.
- Anti-roll plate poorly adjusted.
- Anti-roll plate poorly aligned
relative to knife edge.
- Wrong clearance angle
selected.
- Knife blunt or damaged.
- Set correct clearance angle.
- Use different part of knife or
replace knife.
Sections not properly flattened
despite correct temperature
and correctly aligned anti-roll
plate
- Knife and/or anti-roll plate dirty.
- Edge of anti-roll plate dam-
aged.
- Clean with dry cloth or brush.
- Replace anti-roll plate.
- Blunt knife.
- Use different part of knife or
replace knife.
Instruction Manual V1.1 02/2000
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6. Troubleshooting, applications tips
Problem
Causes
Remedies
Sections curl on anti-roll plate.
- Anti-roll plate does not pro-
trude far enough beyond the
knife edge.
- Readjust correctly.
Scraping noise during section-
ing stroke and specimen return
stroke.
- Anti-roll plate protrudes too far
beyond the knife edge and is
scraping against the specimen.
- Readjust correctly.
Ondulated sections.
- Knife damaged.
- Use different part of the knife
or replace knife.
- Replace anti-roll plate.
- Edge of anti-roll plate damaged.
Chatter marks form during
sectioning.
- Specimen insufficiently frozen
onto specimen disc.
- Refreeze specimen onto disc.
- Check disc clamping.
- Specimen disc not clamped
tightly enough.
- Specimen holder ball joint not
clamped.
- Check ball joint clamping.
- Check knife clamping.
- Knife not clamped tightly
enough.
- Selected section thickness too
thick - specimen has come off
the specimen disc.
- Refreeze specimen onto disc.
- Specimen very hard and inho-
mogeneous.
- Increase section thickness; if
possible, reduce specimen
surface.
- Blunt knife.
- Use different part of knife or
replace knife.
- Knife profile inappropriate for
the type of specimen to be
sectioned.
- Use knife with a different pro-
file.
- Wrong clearance angle.
- Readjust clearance angle set-
ting.
Condensation forms on anti-roll
plate and knife during cleaning.
- Brush, forceps, cloth or other
cleaning item too warm.
- Accessories and cleaning
material to be used pre-cooled
only. - Store on storage shelves
inside the cryochamber.
Leica CM3050 S – Cryostat
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6. Troubleshooting, applications tips
Causes
Remedies
Problem
- Anti-roll plate protrudes too far
beyond the knife edge. Adjust-
ment was done in the direction
of the knife.
- Replace anti-roll plate; in
future, lift away from the knife
when aligning.
- Handle anti-roll plate more
carefully.
Anti-roll plate damaged after
adjustment.
- Wrong temperature for the
tissue to be sectioned.
- Select correct temperature.
- Wait until correct temperature
has been reached.
Thick/thin sections.
- Knife profile inappropriate for
the specimen to be sectioned.
- Use knife with different profile
(c or d) or possible switch to
disposable blade system.
- Remove ice.
- Ice build-up on the knife back.
- Handwheel rotation not uni-
form or inappropriate rotation
speed.
- Adapt speed.
- Knife not clamped tightly
enough.
- Specimen disc not clamped
correctly.
- Check knife clamping.
- Check disc clamping.
- Embedding medium poured
onto cold specimen disc; spec-
imen comes off the disc once
frozen.
- Place embedding medium on
luke-warm specimen disc,
inside the cryochamber place
the specimen onto the disc and
freeze in quick-freeze shelf.
- Use different part of knife or
replace knife.
- Blunt knife.
- Incorrect clearance angle.
- Specimen dried out.
- Set correct clearance angle.
- Prepare new specimen.
- Anti-roll plate too warm or
incorrectly adjusted.
- Static electricity.
- Fat on corner or edge of anti-
roll plate.
- Cool or readjust anti-roll plate.
Tissue sticks to the anti-roll
plate.
- Eliminate cause.
- Remove fat (alcohol).
- Knife rusty.
- Remove rust.
- Static electricity or draft.
- Anti-roll plate too warm.
- Eliminate cause.
- Cool anti-roll plate.
Flattened sections curl up as
soon as anti-roll plate is lifted
from the knife.
Instruction Manual V1.1 02/2000
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6. Troubleshooting, applications tips
Problem
Causes
Remedies
Sections tear.
- Temperature too low for the
tissue to be sectioned.
- Select higher temperature and
wait for the new temperature
to be reached.
- Knife blunt, dirty, dusty, frosted
or rusty.
- Eliminate cause (--> see details
on individual problems).
- Exchange anti-roll plate.
- Upper edge of anti-roll plate
damaged.
- Hard particles in the tissue.
- If application permits, section
at lower plane.
- Clean.
- Rear face of knife dirty.
Inconsistent or insufficient
specimen feed.
- Microtome was not completely
dry when refrigeration was
- Remove microtome from cham-
ber and dry - possibly with hair-
dryer (hairdryer only to be used
outside the cryochamber!) or at
ambient temperature.
switched on; ice build-up inside
the micrometer mechanism.
- Microtome defective.
- Call Technical Service.
Specimen disc cannot be
removed.
- Specimen disc stuck to quick-
freeze shelf or specimen head
due to moisture on underside
of specimen disc.
- Apply strong alcohol to contact
point or heat the specimen
head.
Cryostat inoperational.
- Mains plug not properly con-
nected.
- Check mains plug connection.
- Automatic cut-out has been
triggered.
- Reconnect automatic cut-out
(switch instrument back on).
Sectioning motor inoperational.
- Footswitch not connected.
- Automatic cut-out of sectioning
- Connect footswitch.
- Reconnect automatic cut-out
(push inwards until it locks in
place).
motor has been
gered.
- Motor defective.
trig-
- Call Technical Service.
No or insufficient refrigerating
performance.
- Stopper not placed properly
into drain in bottom of cryo-
chamber.
- Close drain with stopper.
- Compressor defective.
- Leak in cooling system.
- Call Technical Service.
- Call Technical Service.
Leica CM3050 S – Cryostat
51
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6. Troubleshooting, applications tips
6.3 Reference chart for temperature settings (in minus °C)
Tissue
10 - 15
15 - 25
25 - 50
Adrenal
ꢀ
Bone marrow
Brain
❄
ꢀ
Bladder
ꢀ
ꢀ
Breast - fatty
Breast - little fat
Cartilage
Cervical
ꢀ
ꢀ
ꢀ
ꢀ
Fatty
ꢀ
ꢀ
Heart and vascular
Intestinal
Kidney
ꢀ
ꢀ
Laryngeal
Lip
ꢀ
ꢀ
ꢀ
ꢀ
ꢀ
Liver
Lung
Lymphoid
Muscular
Nose
ꢀ
ꢀ
ꢀ
ꢀ
ꢀ
Pancreatic
Prostate
ꢀ
ꢀ
ꢀ
ꢀ
Ovarian
Rectal
Skin with fat
Skin without fat
Spleenal or bloody tissue
Testicular
Thyroid
ꢀ
ꢀ
ꢀ
ꢀ
ꢀ
ꢀ
Tongue
Uterus curettage
ꢀ
Please note: The recommended temperature settings are based on long-term experience. However, they can only be
guidelines for general orientation, as each individual specimen may require particular adjustments.
Instruction Manual V1.1 02/2000
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7. Disinfection, cleaning and maintenance
7.2 Spray disinfection with Leica Cryofect
7.1 Safety instructions
on disinfection and cleaning
For practical spray disinfection, we recommend
Leica Cryofect which is fully effective at tem-
peratures in the negative range down to -20 °C.
When disinfecting the instrument,
make sure to observe the following
safety instructions:
•
Set chamber temperature -20 °C or warmer.
•
Remove specimens from the chamber and
store safely.
•
•
‘Disinfection and Cleaning’
(Chapter 2.3.10)
•
•
•
•
Carefully remove knife / blade from knife
holder.
‘Handling microtome knives /
blades’
(Chapter 2.3.4)
Remove section waste tray from cryocham-
ber and empty.
•
•
•
‘Defrosting / handling frozen
tissue’
(Chapter 2.3.7)
Remove remaining section waste from cryo-
chamber.
Working accessories (brushes, specimen
holders etc.) can be disinfected inside the
cryochamber.
‘Frozen instrument parts and
accessories’
(Chapter 2.3.8)
•
Once the selected chamber temperature has
been reached, spray Leica Cryofect on the
surfaces and accessories to be disinfected.
‘Infectious / radioactive material’
(Chapter 2.3.9)
•
•
Allow to soak for 15 minutes.
Use paper towels or another type of
disposable cleaning cloths to wipe up
disinfectant and remaining section waste.
•
•
•
Dispose of paper towels together with sec-
tion waste.
If previously altered, set chamber tempera-
ture back to its former value.
Put specimens back into the cryochamber.
Leica CM 3050 S – Cryostat
53
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7
Disinfection, cleaning and maintenance
•
•
•
Allow cryochamber to dry thoroughly.
Reinstall microtome (see chapter 7.5.3).
Only when they are completely dry, reinsert
the disinfected accessories / tools into the
cryochamber.
7.3 Disinfection with conventional
disinfectants
•
•
Switch the instrument off.
Carefully remove knife / blade as well as spec-
imens and accessories from the chamber.
Remove section waste from the chamber
and dispose of it.
•
•
•
Reinsert the sliding window.
Switch the instrument back on.
•
•
•
•
Once a suitable chamber temperature has
been reached, return the specimens to the
cryochamber.
Remove sliding window (see chapter 7.6 ‘Ex-
changing the fluorescent light lamp’).
Remove microtome (see chapter 7.5.1
‘Removing the microtome’).
Allow the microtome to thaw, disinfect and
allow to dry thoroughly.
7.4 Cleaning
•
When necessary, the instrument surfaces
can be cleaned with mild commercial house-
hold cleaners.
Drying the microtome:
•
•
Use a hairdryer: dry and before
reinstalling into the chamber
allow the microtome to cool
down to room temperature.
•
Surfaces which are potentially contaminated
(infectious germs) should always be cleaned
with alcohol disinfectants!
Allow to dry at room temperature
(at least over night - longer,
if necessary).
•
•
•
•
Disinfect and dry disassembled parts
(accessories and tools).
Disinfect chamber walls with commercial
alcohol disinfectant.
Place an adequate container underneath the
drain tube at the right side of the instrument.
Pull stopper out of chamber bottom and
drain off disinfecting solution into the con-
tainer.
•
Put stopper back into drain in cryochamber.
Instruction Manual V1.2 - 11/2006
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7. Disinfection, cleaning and maintenance
7.5 Removing / reinstalling the microtome
7.5.2 Disassembling the specimen head
(instruments w/specimen cooling only)
7.5.1 Removing the microtome
•
Use Allen key size 5 to remove screw (2)
from the center of the specimen head (1).
When removing the microtome
make sure to observe the following
safety instructions:
•
‘Removing / reinstalling
the microtome’
(Chapter 2.3.11)
•
‘Defrosting / handling frozen
tissue’
(Chapter 2.3.7)
•
•
•
Do not twist the refrigerating tube (see
chapter 2.3.11 ‘Removing / reinstalling the
microtome’).
Hold hook (4) (part of standard delivery) in
one of your hands and with your other hand
rest refrigerating tube (3) on hook.
•
•
‘Infectious / radioactive material’
(Chapter 2.3.9)
‘Disinfection and cleaning’
(Chapter 2.3.10)
Insert hook (4) with refrigerating tube (3) into
the opening above mark (▼).
•
Prior to removing the microtome, carry out
preparation steps as per chapter 7.3 (switch
instrument off, remove accessories etc.)
Leica CM 3050 S – Cryostat
55
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7. Disinfection, cleaning and maintenance
•
•
Remove plug of temperature sensor (7).
Remove plug of coarse feed motor:
7.5.3 Reinstalling the microtome
Pull bushing backward (arrow 1) and hold.
Place your thumb between plug (6) and
socket at the microtome (arrow 2).
To remove plug (6) from microtome, pull it
away from the microtome while at the same
time carrying out a slight jogging movement
When reinstalling the microtome
make sure to observe the following
safety instructions:
•
‘Removing / reinstalling
the microtome’
(Chapter 2.3.11)
(arrows 3).
7
9
•
Display message ‘Dry Microtome’
(Chapter 2.3.12)
6
8
•
•
•
Lock handwheel in lower position.
Place microtome in chamber.
Put one drop of cryostat oil per surface on
the contact surfaces of plastic coupling (11)
and handwheel coupling (12).
Place plastic coupling (11) on handwheel
coupling (12).
Push microtome slightly towards the right
until axle (9) fits tightly into coupling (11).
Unlock handwheel.
Adjust the parts into each other by rotating
the handwheel slightly backward and forth.
Lock handwheel again in lower position.
Tighten screws (8).
Reconnect plugs of coarse feed motor (6)
and temperature sensor (7).
3
3
•
•
1
•
•
Loosen screws (8) with Allen key.
Lift microtome a little and pull slightly to the
left.
•
•
•
This loosens the plastic coupling (11) which
connects the two axles.
•
•
•
•
•
Mount specimen head (in reverse order as
described on previous page).
Insert accessories (storage shelf, section
waste tray etc.).
Insert sliding window.
•
•
Connect instrument to mains and switch
back on.
•
Remove the microtome from the chamber.
Instruction Manual V1.2 - 11/2006
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7. Disinfection, cleaning and maintenance
7.6 Exchanging the fluorescent light lamp
Removal
•
The lamp (3) is located behind the glare
shield (4).
Prior to exchanging the lamp,
please read and observe the fol-
lowing safety instructions:
•
Carefully hold lamp with both of your hands.
Slightly pull the lamp downward at the left
side to remove it from fastening clip (5).
Pull the lamp towards the left to remove it
from its socket (6).
•
•
‘Maintenance’
(Chapter 2.3.13)
Removing the sliding window
•
Hold sliding window (1) at grip bar (2), lift
slightly and pull out towards yourself.
Installing the replacement lamp
•
Hold the lamp in correct position (see draw-
ing below) and push towards the right until it
locks into the socket.
•
Push the lamp slightly upwards until it locks
into the clip.
•
•
Put the sliding window back in place.
Reconnect the instrument to mains and
switch it back on.
Leica CM 3050 S – Cryostat
57
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8. Warranty and service
Warranty
Leica Microsystems Nussloch GmbH guarantees that the contractual prod-
uct delivered has been subjected to a comprehensive quality control
procedure based on the Leica in-house testing standards, and that the prod-
uct is faultless and complies with all technical specifications and/or agreed
characteristics warranted.
The scope of the warranty is based on the content of the concluded agree-
ment. The warranty terms of your Leica sales organization or the organiza-
tion from which you have purchased the contractual product shall apply
exclusively.
Technical service information
If you require technical service or replacement parts, please contact your
Leica sales representative or dealer who sold the product.
Please provide the following information:
•
•
•
•
Model name and serial number of the instrument.
Location of the instrument and name of the person to contact.
Reason for the service call.
Date of delivery.
Decommissioning and disposal
The instrument or parts of the instrument must be disposed of in compliance
with the local laws.
Instruction Manual V1.2 - 11/2006
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9. Appendix
1. Electrohydraulic height adjustment
1.3 Safety instructions
An electrohydraulic lifting device for individual
working height adjustment is available as an
optional accessory for the CM3050 S cryostat
series.
Prior to operating the height adjustment device,
make sure to read the present instruction manu-
al. Pay special attention to the following safety
instructions:
1.1 Designated use
Prior to connecting the height ad-
justment device to mains, check to
make sure that the nominal voltage
and frequency indications on the
device name plate correspond to
the actual mains voltage in your
lab!
The electrohydraulic height adjustment device
has been designed exclusively for adjustment
of the instrument working level to the individual
height of the user.
It has been designed for use with the Leica cry-
ostat series CM3050 S only and may under no
circumstances be used to lift other instruments
or persons.
Do not move the height adjustment
device with the Leica CM3050 S in-
stalled on the frame. If the place of
installation needs to be changed,
first take the Leica CM3050 S down
from the height adjustment device
and then move both devices sepa-
rately.
Damage resulting from improper use of the
product and/or faulty operation invalidates the
warranty.
Leica will not assume liability for any such dam-
age.
1.2 Standard delivery
Never place your feet underneath
the U-frame when lowering the
height adjustment device! Risk of
injury!
Electrohydraulic height adjustment device for
cryostat series CM3050 S, complete outfit, con-
sisting of a U-shaped frame on four height-ad-
justable feet and a two-key control unit.
Only authorized Leica technical ser-
vice engineers may carry out re-
pairs on both the Leica CM3050 S
and the height adjustment device.
This applies especially to all work
carried out on the hydraulic system
of the height adjustment device.
The height adjustment device is available in 2
voltages:
1. 230 – 240 V / 50 Hz – order no. 0443 26147
2. 230 – 240 V / 50 Hz – order no. 0443 26147
Leica CM 3050 S – Cryostat
59
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9.
Appendix
1.4 Installation
•
Open the shipping box and remove all packing material including the Sty-
rofoam pieces.
•
•
Take the height adjustment device out of the box.
At the place of installation, place the U-frame on the floor with the open
side facing yourself. Adjust the U-frame parallel to the wall, maintaining a
distance of approx. 10 cm between wall and U-frame.
•
Push the (ab) button to lower the height adjustment device to the lowest
possible position.
•
In order to be able to move the instrument,
use a fork wrench and unscrew the rollers
on which the Leica CM3050 S moves by
about 2 cm.
•
•
Roll the cryostat onto the U-frame as far as it
will go. The rear of the cryostat housing has
to fit closely to the rear bar of the U-frame.
Roll the cryostat onto the U-frame as far as it
will go. The rear of the cryostat housing has
to fit closely to the rear bar of the U-frame.
When placing the instrument onto
the U-frame, make sure the power
cord does not get caught and thus
crushed between U-frame and cry-
ostat housing.
•
Plug the height adjustment device into the
mains socket. The unit is now ready for use.
Instruction Manual V1.2 - 11/2006
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9. Appendix
1.5 Control keys
1.7 Troubleshooting
1. Slight and uniform loss of height of the de-
vice in the course of several weeks is nor-
mal. Remedy:
Correct the loss of height by pressing the
button until the instrument is lifted back up to
the desired working level.
2. The cryostat is in an inclined position due to
an uneven upward movement of the lifting
pistons. Difference of level among the four
legs > 5 mm. Remedy:
Have the instrument travel once up and
down over the entire height adjustment dis-
tance: press
until the instrument reach-
until
es the upper limit position and then
the instrument reaches the lowest possible
position. Then lift the instrument back to reg-
ular working height.Should the problem re-
occur several times, call Leica Technical
Service.
The control keys are located on top of the con-
trol unit (see photograph).
•
•
To lift the instrument, press
.
3. The height adjustment device does not
reach the maximum upper level or the instru-
ment lowers itself by a relatively large dis-
tance (> 5 cm) within a short time.
To lower the instrument, press
.
As long as a button is held, the instrument will
go up or down until reaching the upper or lower
limit.
Remedy: Call Leica Technical Service.
1.8 Technical Data
Nominal voltage:
Nomi nal frequency: 50 Hz
230 - 240 V
100 - 115 V
60 Hz
1.6 Maintenance and care
•
Protect the lifting pistons in the four legs of
the height adjustment device against dust
and water.
Type of actuation: Elektrohydraulik
Total height of stroke: 230 mm
Carrying power:
Dimensions:
Width:
200 kp
•
•
Approximately every six months lubricate the
legs with a thin coat of resin-free oil.
880 mm (without control unit)
1030 mm (with control unit)
555 mm
Once every year have the height adjustment
device checked by an authorized Leica ser-
vice engineer.
Depth:
Weigth:
approx. 30 kg
Leica CM 3050 S – Cryostat
61
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9.
Appendix
2. Ordering information - accessories
2.1 Knife holders
Knife-holder CN for reusable microtome knives´w/anti-roll guide,
adjustable knife guard and knife support bars for slim and wide knives ............................................. 0419 18649
Knife support bar for knife holder CN, for slim knives .............................................................................. 0419 19426
Knife support bar for knife holder CN, for wide knives ............................................................................ 0419 19427
Knife-holder CE w/ glass anti-roll guide, for low profile disposable blades,
with lateral displacement feature ................................................................................................................ 0419 30383
Knife-holder CE w/ glass anti-roll guide, for high profile disposable blades
with lateral displacement feature ................................................................................................................ 0419 30390
Knife-holder CS for reusable knives, with one knife support
(mounted optionally on the left or right), anti-roll guide and knife guard ............................................. 0419 19787
Auxiliary clamping device for knife holder CS
(to be used instead of knife support, for increased stability) ................................................................. 0419 20971
Knife support bar for knife holder CS .......................................................................................................... 0419 25681
Knife holder base for knife holders CN, CE and CS................................................................................... 0419 26140
Knife rest with section collecting tray for knife holder CS ...................................................................... 0419 18996
2.2 Specimen discs
Specimen disc, 20 mm ø ................................................................................................................................ 0370 08636
Specimen disc, 25 mm ø ................................................................................................................................ 0416 19275
Specimen disc, 30 mm ø ................................................................................................................................ 0370 08587
Specimen disc, 40 mm ø ................................................................................................................................ 0370 08637
Specimen disc, 55 mm ø ................................................................................................................................ 0419 26491
Specimen disc, 50 x 90 mm ............................................................................................................................ 0419 26750
other sizes on request
2.2 Accessories
90° prism ........................................................................................................................................................... 0443 25949
Mobile heat extractor..................................................................................................................................... 0443 26836
Thermoblock .................................................................................................................................................... 0398 18542
Glass anti-roll guide, complete assy., for knife holder CE ....................................................................... 0419 30402
Glass anti-roll guide upgrade kit,
for retrofitting knife holders CN, CS (for C-profile knives) ...................................................................... 0419 30403
2.4 Consumables
OCT embedding compound for freezing tissue specimens onto specimen discs,
bottle of 125 ml ................................................................................................................................................. 0201 08926
Cryostat oil No. 407, bottle of 100 ml ............................................................................................................ 0336 06099
Instruction Manual V1.2 - 11/2006
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10. EC Declaration of Conformity
EC Declaration of Conformity
We herewith declare, in exclusive responsibility, that the
Leica CM3050S – Cryostat
was developed, designed and manufactured to conform with the
•
•
•
Council Directive 73/23/EEC (Low Voltage),
Council Directive 89/336/EEC, Appendix I (Electromagnetic Compatibility) and
European council Directive 98/79/EG (IVDD).
The following harmonized standards were applied:
•
•
•
•
•
EN 61010-1: 2001
Safety requirements for electrical equipment for measurement, control and laboratory use -
Part 1: General requirements
EN 61010-2-101: 2002
Safety requirements for electrical equipment for measurement, control and laboratory use -
Part 2-101: Particular requirements for in vitro diagnostic (IVD) medical equipment
EN 61326-1: 1997 + A1: 1998 + A2: 2001 + A3: 2003
Electrical equipment for measurement, control and laboratory use - EMC requirements -
Part 1: General requirements
EN 61000-3-2: 2000
Electromagnetic compatibility (EMC)
Part 3-2: Limits - Limits for harmonic current emissions
EN 61000-3-3: 1995 + A1: 2001
Part 3: Limits -
Section 3: Limitation of voltage fluctuations and flicker in low-voltage
supply systems for equipment with rated current £ 16 A
Electromagnetic compatibility (EMC)
•
EN 418: 1992
Emergency stop equipment.
Principles for design.
•
EN 1037: 1995
Safety of machinery.
Prevention of unexpected start-up.
In addition, the following in-house standards were applied:
DIN EN ISO 9001: 2000.
•
Leica Microsystems Nussloch GmbH
Postfach 1120
D-69222 Nussloch
. . . . . . . . . . . . . . . . . . . . . . . . . . . .
Dag Graupner
Managing Director
January 12, 2004
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11. Decontamination Certificate (master)
Dear Customer,
any product which is be returned to Leica Microsystems or serviced on site, must be cleaned and
decontaminated in the appropriate manner. This certificate, duly completed, must be placed in the unit
prior to packaging or handed over to the service engineer. Packages will not be opend nor servicing
commenced until the Company or service engineer have received a satisfactory certificate. Should
returned goods be considered a hazard by the Company, they will be returned immediately to the
customer at his/her expense.
NB: Microtome knives must be in boxes.
Description
Name/Model
KAT No.
Fabr. No.
Quantity
Tick Box A if applicable. Otherwise please complete all parts of B, providing
further information as requested or appropriate.
Yes
This equipment has not been in contact with unfixed biological samples.
A
B
1
This equipment has been exposed internally or externally to hazardous materials as
indicated below:
Yes No
Please provide further detail here:
Blood, body fluids, pathological samples
Other biohazards
Chemicals/substances hazardous to health
Other hazards
2
This equipment has been cleaned and decontaminated:
If yes, give details of the method:
Yes No
Please provide further detail here:
If no*, please indicate why not:
* Such equipment must not be returned without the written agreement of Leica Microsystems.
3
The equipment has been prepared to ensure safe handling/transportation.
Whenever possible, please use the original transportation case/box.
Yes No
Instruction Manual V1.2 - 11/2006
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11. Decontamination Certificate (master)
Important - to avoid refusal of shipment:
Place one copy in the unit prior to packaging or hand it over to the service engineer. Customer as-
sumes all responsibility for the immediate return shipment of articles sent to Leica without proper
decontamination documentation.
If you have any further question, please call your local Leica organisation.
Leica Internal Use: If applicable, note corresponding Job and RAN-/RGA-Number:
Job Sheet No.:
____________________
SU Return Goods Authorisation: ____________________
BU Return Authorisation Number: ____________________
Signature/Date
Institute
Department
Adress
Name
Position
eMail
Phone
Facsimile
Leica Microsystems Nussloch GmbH
Heidelberger Str. 17-19
69226 Nussloch, Germany
Phone:++49 (0) 6224 143 0
Fax: ++49 (0) 6224 143 200
Leica CM 3050 S – Cryostat
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Instruction Manual V1.2 - 11/2006
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